CDS

Accession Number TCMCG057C39199
gbkey CDS
Protein Id XP_018446904.1
Location join(4760393..4760618,4760697..4760835,4760966..4761158,4761252..4761362,4761653..4761715,4761860..4761964)
Gene LOC108818431
GeneID 108818431
Organism Raphanus sativus

Protein

Length 278aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018591402.1
Definition PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Removes the formyl group from the N-terminal Met of newly synthesized proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01462        [VIEW IN KEGG]
EC 3.5.1.88        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016810        [VIEW IN EMBL-EBI]
GO:0016811        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018206        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031365        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042586        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043686        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCGTCTGTAACTGTTTCCTCCAAGCTCCACCTCTCTCTCGCTTCCTATCACCGGTTTTCTCTCGCCGCGCTACGAATCTCTTCGCCGGCTATTGTCAGCTCAAATCAACCGTCATGTTCTCCTCCTCCTCCTCCTCCGCCGCGAACCGAACCGGACCGTTGACATCTCCCGTCAGAGCTGAAGTAAAGCGCGTCTCGCGGAAGGACGATCAAGTAGCTTCTGCTTCTGATCTTCAATTCGAGACGCCGTTGAAGATCGTCGAGTATCCGGATCCTATCTTACGCGCTAAGTGCAAGAGGATTGGTGTTTTCGACGAGAATCTGAAGAACTTGGCCGATAATATGTTCGATGTTATGTACAAAACGGATGGCATCGGGCTCTCAGCACCACAAGTGGGGCTCAATGTTCAGCTCATGGTGTTTAATCCAGCTGGGGAGTCTGGTGAAGGAGAAGAGATTGTTCTTGTGAATCCGAAAATCAATAAATATTCTGATAAATTAGTACCGTTTAACGAAGGATGCTTATCCTTCCCTGGGATCTATGCTGATGTTATTCGACCACAATCTGTCAAGATTGACGCAAGGGACATTACTGGTGCTAGATTTTCAATCAGTCTATCACGTTTACCTGCACGAGTGTTCCAGCATGAATACGACCACCTTGAGGGAGTTCTGTTCTTCGACAGAATGACGGATGACGTTCTTGACACCATTCGTGAAGAGTTAGAGGCCTTGGAAAAGAAGTACGAAGAAAAAACTGGATTGCCAAGCCCTGAAAAAGTACAAGCACGACAAAAAAAGAAAGCAGGAGTTGGTTTTGGCAAACGTCGATGA
Protein:  
MAVCNCFLQAPPLSRFLSPVFSRRATNLFAGYCQLKSTVMFSSSSSSAANRTGPLTSPVRAEVKRVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVIRPQSVKIDARDITGARFSISLSRLPARVFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKRR